Combining FRET and optical tweezers to study RhoGTPases spatio-temporal dynamics upon local stimulation

Main Article Content

Federico Iseppon
Luisa MR Napolitano
Vincent Torre
Dan Cojoc

Keywords

FRET, growth cones, guidance molecules, local stimulation, Optical Tweezers.

Abstract

Local stimulation with optical tweezers has been used to mimic natural stimuli that occur in biological processes such as cell migration or differentiation. Carriers (beads and lipid vesicles) with sizes down to 30 nm can be manipulated with a high spatial and temporal resolution: they are positioned with a sub-micrometric precision on a specific cell compartment and the beginning of the stimulation can be triggered with millisecond precision. RhoGTPases are a Ras-related family of proteins that regulate many different functions including cell polarity, microtubule dynamics and membrane transport pathways. Here we combine local stimulation with FRET microscopy to study RhoGTPases spatial and temporal activation following guidance cue local stimulation. We used two different vectors for local delivery: silica micro-beads and micro-sized lipid vesicles. The experimental methods associated with neuronal growth cone local stimulation are discussed in detail, as well as the analysis methods. Here we present a protocol that enables to study neuronal growth cone cytoskeleton rearrangements in response to a gradient of molecules in a way that better mimics physiological conditions, and it can be similarly applied to each secreted molecule involved in cell signaling.

Downloads

Download data is not yet available.

Metrics

Metrics Loading ...
Abstract 39 | HTML Downloads 105 PDF Downloads 151

References

1. Etienne-Manneville, S., Hall, A. RhoGTPases in cell biology. Nature. 420, 629 – 635, 10.1038/nature01148, (2002).
2. Pertz, O. Spatio-temporal RhoGTPases signaling – where are we now? J. Cell Sci. 123, 1841 - 1850, doi: 10-1242/jcs.064345, (2010).
3. Luo, L. RhoGTPases in neuronal morphogenesis. Nat. Rev. Neurosci. 1, 173 – 180, doi: 10.1038/35044547, (2000).
4. Dickinson, B. J. Rho GTPases in growth cone guidance. Curr. Opin. Neurobiol. 11, 103 – 110, doi: 10.1016/S0959-4388(00)00180-X, (2001).
5. Gallo, G., Letourneau, P. C. Regulation of growth cones actin filaments by guidance cues. J. Neurobiol. 58, 92 – 102, 10.1002/neu.10282, (2003).
6. Ridley, A. J. RhoGTPases and cell migration. J. Cell Sci. 114 (Pt 15), 2713 – 2722, (2001).
7. Hodgson, L., Shen, F., Hahn, K., Biosensors for characterizing the dynamics of Rho family GTPases in living cells. Curr. Prot. Cell Biol. Chapter 14:Unit 14.11.1-26. doi: 10.1002/0471143030.cb1411s46, (2010).
8. Mochizuki, N., Yamashita S., Kurokawa K., Ohba Y., Nagai T. et al. Spatio-temporal images of growth-factor-induced activation of Ras and Rap1. Nature. 411 (6841), 1065 – 1068, (2001).
9. Itoh, R. E., Kurokawa, K., Ohba, Y., Yoshizaki, H., Mochizuki, N., Matsuda, M. Activation of rac and cdc42 video imaged by fluorescence resonance energy transfer-based single-molecule probes in the membrane of living cells. Mol. Cell Biol. 22(18), 6582-6591, doi: 10.1128/MCB.22.18.6582.6592.2002, (2002).
10. Kraynov, V. S., Chamberlain, C., Bokoch, G. M., Schwartz, M. A., Slabaugh, S., Hahn, K. M. Localized Rac activation dynamincs visualized in living cells. Science. 290(5490), 333-337, doi: 10.1126/science.290.5490.333, (2000).
11. Pujic, Z., Giacomantonio, C. E., Unni, D., Rosoff, W. J., Goodhill, G. J. Analysis of the growth cone turning assay for studying axon guidance. J. Neurosci. Methods. 170, 220 – 228, (2008).
12. Dupin, I., Dahan, M., Studer, V. Investigating axonal guidance with microdevice-based approaches. The Journal of neuroscience: the official journal of the Society for Neuroscience 33, 17647 – 17655, (2013).
13. D'Este, E., Baj, G., Beuzer, P., Ferrari, E., Pinato, G., Tongiorgi, E., Cojoc, D. Use of optical tweezers technology for long-term, focal stimulation of specific subcellular neuronal compartments, Integr. Biol. 3, 568 – 577, (2011).
14. Kress, H., Park GJ., Mejean CO., Forster JD., Park J. et al. Cell stimulation with optically manipulated microsources. Nature methods 6, 905 – 909, doi: 10.1038/nmeth.1400, (2009).
15. Sun, B., Chiu, D. T. Determination of the encapsulation efficiency of individual vesicles using single-vesicle photolysis and confocal single-molecule detection. Analytical chemistry 77, 2770-2776, doi: 10.1021/ac048439n, (2005).
16. Pinato, G., CojocD., Lien LT., Ansuini A., Ban J. et al. Less than 5 Netrin-1 molecules initiate attraction but 200 Sema3A molecules are necessary for repulsion. Scientific reports 2, 675, doi: 10.1038/srep00675, (2012).
17. Wong, J. T., Wong, S. T., O’Connor, T. P., Ectopic Semaphorin-1A functions as an attractive guidance cue for developing peripheral neurons. Nature Neuroscience 2, 798 – 803, doi: 10.1038/12168, (1999).
18. Iseppon, F., Napolitano, L. M. R., Torre, V., Cojoc, D. Cdc42 and RhoA reveal different spatio-temporal dynamics upon local stimulation with Semaphorin-3A. Fron. Cell. Neurosci. 9(333), doi: 10.3389/fncel.2015.00333, (2015).
19. Murakoshi, H., Wang, H., Yasuda, R. Local persistent activation of RhoGTPases during plasticity of single dendritic spines. Nature. 472, 100 – 104, doi: 10.1038/nature09823, (2011).
20. Vilela, M., Halidi, N., Besson, S., Elliot, H., Hahn, K., et al. Fluctuation analysis of activity biosensor images for the study of information flow in signalling pathways. Methods Enzymol. 519, 253-276, doi: 10.1016/B978-0-12-405539-1.00009-9, (2013).
21. Pinato, G., Raffaelli, T., D’Este, E., Tavano, F., Cojoc, D. Optical delivery of liposome encapsulated chemical stimuli to neuronal cells. J. Biomed. Opt. 16(9), 095001, doi: 10.1117/1.3616133, (2011).
22. Dupin, I., Dahan, M., Studer, V. Investigating axonal guidance with microdevice-based approaches. J. Neurosci. 33(45), 17647-17655, doi: 10.1523/JNEUROSCI .3277-13.2013, (2013).
23. Fritz, R.D., Letzelter M., Reimann A., Martin K., Fusco L. et al. A versatile toolkit to produce sensitive FRET biosensors to visualize signaling in time and space. Sci. Signal. 6(285), rs12, doi: 10.1126/scisignal.2004135, (2013).
24. Lam, A.J., St-Pierre F., Gong Y., Marshall JD., Cranfill PJ. et al. Improving FRET dynamic range with bright green and red flurescent proteins. Nat. Methods. 9(10), 1005-1012, doi: 10.1038/nmeth.2171, (2012).
25. Grashoff, C., Hoffman BD, Brenner MD, Zhou R., Parsons M. et al. Measuring mechanical tension across vinculin reveals regulation of focal adhesion dynamics. Nature. 466(7303), 263-266, doi: 10.1038/nature09198, (2010).
26. Wang, Y., Botvinick EL., Zhao Y., Berns MW., Usami S. et al. Visualizing the mechanical activation of Src. Nature. 434(7036), 1040-1045, doi: 10.1038/nature03469, (2005).